datacatalog.formats.sample_attributes package

Submodules

datacatalog.formats.sample_attributes.convert module

class datacatalog.formats.sample_attributes.convert.SampleAttributes(schemas=[], targetschema=None, options={}, reactor=None)[source]

Bases: datacatalog.formats.converter.Converter

Convert generic samples attributes file to sample-set schema

FILENAME = 'sample_attributes'
VERSION = '0.0.1'
convert(input_fp, output_fp=None, verbose=True, config={}, enforce_validation=True)[source]

Do the conversion by running a method in runner.py

datacatalog.formats.sample_attributes.runner module